Package: multinomialLogitMix 1.1

multinomialLogitMix: Clustering Multinomial Count Data under the Presence of Covariates

Methods for model-based clustering of multinomial counts under the presence of covariates using mixtures of multinomial logit models, as implemented in Papastamoulis (2023) <doi:10.1007/s11634-023-00547-5>. These models are estimated under a frequentist as well as a Bayesian setup using the Expectation-Maximization algorithm and Markov chain Monte Carlo sampling (MCMC), respectively. The (unknown) number of clusters is selected according to the Integrated Completed Likelihood criterion (for the frequentist model), and estimating the number of non-empty components using overfitting mixture models after imposing suitable sparse prior assumptions on the mixing proportions (in the Bayesian case), see Rousseau and Mengersen (2011) <doi:10.1111/j.1467-9868.2011.00781.x>. In the latter case, various MCMC chains run in parallel and are allowed to switch states. The final MCMC output is suitably post-processed in order to undo label switching using the Equivalence Classes Representatives (ECR) algorithm, as described in Papastamoulis (2016) <doi:10.18637/jss.v069.c01>.

Authors:Panagiotis Papastamoulis [aut, cre]

multinomialLogitMix_1.1.tar.gz
multinomialLogitMix_1.1.zip(r-4.7-x86_64)multinomialLogitMix_1.1.zip(r-4.7-arm64)multinomialLogitMix_1.1.zip(r-4.6-x86_64)multinomialLogitMix_1.1.zip(r-4.6-arm64)multinomialLogitMix_1.1.zip(r-4.5-x86_64)
multinomialLogitMix_1.1.tgz(r-4.6-x86_64)multinomialLogitMix_1.1.tgz(r-4.6-arm64)multinomialLogitMix_1.1.tgz(r-4.5-x86_64)multinomialLogitMix_1.1.tgz(r-4.5-arm64)
multinomialLogitMix_1.1.tar.gz(r-4.7-arm64)multinomialLogitMix_1.1.tar.gz(r-4.7-x86_64)multinomialLogitMix_1.1.tar.gz(r-4.6-arm64)multinomialLogitMix_1.1.tar.gz(r-4.6-x86_64)
multinomialLogitMix_1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
multinomialLogitMix/json (API)

# Install 'multinomialLogitMix' in R:
install.packages('multinomialLogitMix', repos = c('https://mqbssppe.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

cppopenmp

1.00 score 295 downloads 18 exports 31 dependencies

Last updated from:91a3e35ac2. Checks:15 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK148
linux-devel-x86_64OK156
source / vignettesOK172
linux-release-arm64OK139
linux-release-x86_64OK119
macos-release-arm64OK118
macos-release-x86_64OK255
macos-oldrel-arm64OK119
macos-oldrel-x86_64OK203
windows-devel-arm64OK237
windows-devel-x86_64OK179
windows-release-arm64OK202
windows-release-x86_64OK127
windows-oldrel-x86_64OK117
wasm-releaseOK105

Exports:dealWithLabelSwitchingexpected_complete_LLgibbs_mala_samplergibbs_mala_sampler_pptlog_dirichlet_pdflog_mix_prior_derivativelog_prior_mixmala_proposalmala_proposal_cppmix_mnm_logisticmixLoglikelihood_GLMmultinomial_logistic_EMmultinomialLogitMixmyDirichletnewton_raphson_mstepshakeEM_GLMsimulate_multinomial_datasplitEM_GLM

Dependencies:clicodacodetoolscombinatcpp11doParallelfarverforeachggplot2gluegtableisobanditeratorslabel.switchinglabelinglatticelifecyclelpSolveMASSmatrixStatsmvtnormR6RColorBrewerRcppRcppArmadillorlangS7scalesvctrsviridisLitewithr